Sequence Similarity Clusters for the Entities in PDB 4CID

Entity #1 | Chains: A
EH DOMAIN-CONTAINING PROTEIN 2 protein, length: 550 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 80943
95 % 1 2 41550 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 33150
70 % 1 2 32243
50 % 2 4 18469
40 % 2 4 14592
30 % 2 4 15187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5MTV 1 A EH domain-containing protein 4 10090
2 4CID 1 A EH DOMAIN-CONTAINING PROTEIN 2 10090 3.6.5.5 | Details
3 2QPT 1 A EH DOMAIN-CONTAINING PROTEIN-2 10090
4 5MVF 1 A EH domain-containing protein 4 The residues GGS belong to the expression tag. The EHD sequence starts on residue Q22. 10090