4CFH

Structure of an active form of mammalian AMPK


Sequence Similarity Clusters for the Entities in PDB 4CFH

Entity #1 | Chains: A
5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79031
95 % 11 14 6023
90 % 1 1 46679
70 % 16 23 2694
50 % 16 23 2736
40 % 16 23 2741
30 % 16 23 2749
Entity #2 | Chains: B
5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 9497
95 % 9 9 10312
90 % 9 9 10235
70 % 10 10 9106
50 % 10 10 8478
40 % 10 10 8132
30 % 10 10 7605
Entity #3 | Chains: C
5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79363
95 % 1 1 49252
90 % 1 1 46678
70 % 1 1 40932
50 % 1 1 35429
40 % 1 1 32007
30 % 1 1 28294
Entity #4 | Chains: E
5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 3115
95 % 27 34 1740
90 % 27 34 1774
70 % 27 34 1822
50 % 27 34 1874
40 % 27 34 1904
30 % 37 44 1386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2V8Q 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 10116
2 4EAI 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
3 5ISO 3 E, F 5'-AMP-activated protein kinase subunit gamma-1 9606
4 2V92 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 10116
5 4EAJ 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
6 2YA3 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 RESIDUES 1-330 10116
7 2Y8L 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 RESIDUES 1-330 10116
8 2V9J 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 10116
9 6C9G 3 C 5'-AMP-activated protein kinase subunit gamma-1 9606
10 6B1U 3 E, F 5'-AMP-activated protein kinase subunit gamma-1 9606
11 4EAL 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
12 6C9H 3 C 5'-AMP-activated protein kinase subunit gamma-1 9606
13 4EAK 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
14 4EAG 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
15 2Y8Q 3 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 10116
16 6C9F 3 C 5'-AMP-activated protein kinase subunit gamma-1 9606
17 6C9J 3 C 5'-AMP-activated protein kinase subunit gamma-1 9606
18 4CFE 3 E, F 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 9606
19 5EZV 3 E, F 5'-AMP-activated protein kinase subunit gamma-1 9606
20 4ZHX 3 E, F 5'-AMP-activated protein kinase subunit gamma-1 9606
21 5UFU 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
22 6E4U 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
23 6E4W 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
24 4QFR 3 C 5'-AMP-activated protein kinase subunit gamma-1 AMPK gamma 1 10116
25 5T5T 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
26 6E4T 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
27 4CFH 4 E 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 10116
28 5KQ5 3 C 5'-AMP-activated protein kinase subunit gamma-1 10116
29 4QFG 3 C 5'-AMP-activated protein kinase subunit gamma-1 AMPK gamma1 10116
30 4QFS 3 C 5'-AMP-activated protein kinase subunit gamma-1 AMPK gamma 1 10116
31 4CFF 3 E, F 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 9606
32 4RER 3 G 5'-AMP-activated protein kinase subunit gamma-1 Human AMPK gamma1 subunit [S24-G327] 9606
33 6B2E 3 C 5'-AMP-activated protein kinase subunit gamma-1 9606
34 4REW 3 G 5'-AMP-activated protein kinase subunit gamma-1 Human AMPK gamma1 subunit [S24-G327] 9606