4CFH

Structure of an active form of mammalian AMPK


Sequence Similarity Clusters for the Entities in PDB 4CFH

Entity #1 | Chains: A
5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 protein, length: 493 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79298
95 % 11 14 6035
90 % 1 1 47312
70 % 16 23 2702
50 % 16 23 2729
40 % 16 23 2750
30 % 16 23 2717
Entity #2 | Chains: B
5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 9424
95 % 9 9 9733
90 % 9 9 9623
70 % 10 10 8355
50 % 10 10 7851
40 % 10 10 7550
30 % 10 10 7081
Entity #3 | Chains: C
5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79297
95 % 1 1 57132
90 % 1 1 46547
70 % 1 1 40857
50 % 1 1 35296
40 % 1 1 31937
30 % 1 1 28224
Entity #4 | Chains: E
5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 3134
95 % 27 34 1745
90 % 27 34 1775
70 % 27 34 1819
50 % 27 34 1866
40 % 27 34 1907
30 % 37 44 1386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2V8Q 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
2 4EAI 2 B 5'-AMP-activated protein kinase subunit beta-2 UNP residues 189-272 9606
3 2V92 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
4 4EAJ 2 B 5'-AMP-activated protein kinase subunit beta-2 UNP residues 189-272 9606
5 2YA3 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
6 2Y8L 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
7 2V9J 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
8 4EAG 2 B 5'-AMP-activated protein kinase subunit beta-1 UNP residues 187-270 10116
9 2Y8Q 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606
10 4CFH 2 B 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 RESIDUES 187-272 9606