Sequence Similarity Clusters for the Entities in PDB 4BZJ

Entity #1 | Chains: A,C
Protein transport protein SEC31 protein, length: 1273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29206
95 % 1 2 20758
90 % 1 2 20255
70 % 1 2 18682
50 % 1 2 18332
40 % 1 2 15450
30 % 1 2 13978
Entity #2 | Chains: B
Protein transport protein SEC13 protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 4816
95 % 9 12 3967
90 % 9 12 4042
70 % 9 12 3952
50 % 12 15 2385
40 % 12 15 2389
30 % 12 15 2379
Entity #3 | Chains: F
Protein transport protein SEC13 protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 19156
95 % 10 12 3967
90 % 10 12 4042
70 % 10 12 3952
50 % 13 15 2385
40 % 13 15 2389
30 % 13 15 2379

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures