Sequence Similarity Clusters for the Entities in PDB 4BOS

Entity #1 | Chains: A,B
UBIQUITIN THIOESTERASE OTU1 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25377
95 % 2 3 18206 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 3 17846
70 % 2 3 15994
50 % 2 3 14974
40 % 2 3 13929
30 % 2 3 12672
Entity #2 | Chains: C,E
POLYUBIQUITIN-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 152 383 4
95 % 187 477 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 193 488 7
70 % 215 540 9
50 % 218 555 11
40 % 218 559 14
30 % 223 575 19
Entity #3 | Chains: F
OTUD2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures