Sequence Similarity Clusters for the Entities in PDB 4BCJ

Entity #1 | Chains: A
CYCLIN-DEPENDENT KINASE 9 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 20 2203
95 % 11 23 2472 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 11 23 2536
70 % 11 23 2563
50 % 11 23 2580
40 % 13 30 1672
30 % 16 34 1479
Entity #2 | Chains: B
CYCLIN-T1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 5440
95 % 11 23 2373 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 11 23 2440
70 % 12 24 2307
50 % 12 24 2340
40 % 12 24 2369
30 % 12 24 2349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures