Sequence Similarity Clusters for the Entities in PDB 4AU3

Entity #1 | Chains: A,C,D
SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 2784
95 % 3 5 3301 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 3 5 3380
70 % 3 5 3394
50 % 3 5 3339
40 % 3 5 3327
30 % 124 157 229
Entity #2 | Chains: B
SERPYIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66279
95 % 4 5 3301 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 4 5 3380
70 % 4 5 3394
50 % 4 5 3339
40 % 4 5 3327
30 % 125 157 229
Entity #3 | Chains: E,F,G,H,I,J
18ER COLLAGEN MODEL PEPTIDE 15-R8 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures