Sequence Similarity Clusters for the Entities in PDB 4AOO

Entity #1 | Chains: A,B,C,D
PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 607
95 % 6 6 827 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 9 11 584
70 % 9 11 634
50 % 9 11 671
40 % 9 11 700
30 % 9 11 744

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4B0H 1 A, B, C PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
2 4AO5 1 A, B, C, D, E, F SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEO TIDOHYDROLASE YOSS 1423 3.6.1.23 | Details
3 2XX6 1 A, B, C, D SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YOSS 1423 3.6.1.23 | Details
4 2XCE 1 A, B, C, D, E, F PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
5 2XCD 1 A, B, C, D, E, F PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
6 2Y1T 1 A, B, C, D, E, F SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YOSS 1423 3.6.1.23 | Details
7 4APZ 1 1, 2, 3, 4, 5, 6, 7, 8, 9, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
8 4AOZ 1 A, B, C PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
9 4AOO 1 A, B, C, D PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF 1423 3.6.1.23 | Details
10 2BAZ 1 A, B, C hypothetical protein BSU20020 1423 3.6.1.23 | Details
11 2XY3 1 A, B, C, D, E, F SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YOSS 1423 3.6.1.23 | Details