Sequence Similarity Clusters for the Entities in PDB 4A8K

Entity #1 | Chains: A,B,C
RNA-DIRECTED RNA POLYMERASE protein, length: 665 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 17 1016
95 % 23 26 776 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 23 26 806
70 % 23 26 844
50 % 23 26 877
40 % 23 26 924
30 % 23 26 958
Entity #2 | Chains: E
5'-D(*AP*AP*TP*CP)-3' dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
5'-D(*TP*CP)-3' dna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1UVJ 1 A, B, C RNA-directed RNA polymerase 10879 2.7.7.48 | Details
2 1HHS 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
3 1UVM 1 A, B, C RNA-directed RNA polymerase 10879 2.7.7.48 | Details
4 1UVI 1 A, B, C RNA-directed RNA polymerase 10879 2.7.7.48 | Details
5 1UVL 1 A, C, E RNA-directed RNA polymerase 10879 2.7.7.48 | Details
6 1UVK 1 A, C, E RNA-directed RNA polymerase 10879 2.7.7.48 | Details
7 4A8M 2 P, Q, R RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
8 4A8O 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
9 2JLG 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
10 4A8S 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
11 4A8Q 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
12 1HI8 1 A, B P2 PROTEIN 10879 2.7.7.48 | Details
13 1HI0 2 P, Q, R P2 PROTEIN 10879 2.7.7.48 | Details
14 4A8W 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
15 1HHT 2 P, Q, R P2 PROTEIN 10879 2.7.7.48 | Details
16 1UVN 1 A, C, E RNA-directed RNA polymerase 10879 2.7.7.48 | Details
17 2JL9 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
18 1WAC 1 A, B, C P2 PROTEIN 10879 2.7.7.48 | Details
19 4B02 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
20 2JLF 1 A, B, C RNA-DIRECTED RNA POLYMERASE RESIDUES 2-665 10879 2.7.7.48 | Details
21 4A8Y 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
22 4A8F 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
23 4A8K 1 A, B, C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
24 5FJ6 1 A RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
25 5FJ7 2 C RNA-DIRECTED RNA POLYMERASE 10879 2.7.7.48 | Details
26 1HI1 1 A, B, C P2 PROTEIN 10879 2.7.7.48 | Details