Sequence Similarity Clusters for the Entities in PDB 4A5W

Entity #1 | Chains: A
COMPLEMENT C5 protein, length: 1580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 30539
95 % 4 10 4863 Flexibility: High
Max RMSD: 27.7, Avg RMSD: 10.0
PDBFlex
90 % 4 10 4919
70 % 4 10 4870
50 % 4 10 4738
40 % 4 10 4628
30 % 4 10 4497
Entity #2 | Chains: B
COMPLEMENT COMPONENT C6 protein, length: 913 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 18008
95 % 2 5 17942 Flexibility: High
Max RMSD: 37.1, Avg RMSD: 25.7
PDBFlex
90 % 2 5 17592
70 % 2 5 15567
50 % 2 5 14068
40 % 2 5 13083
30 % 2 5 11937

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures