Sequence Similarity Clusters for the Entities in PDB 3ZRY

Entity #1 | Chains: A,B,C
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 610
95 % 10 15 618 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 10 15 648
70 % 42 63 174
50 % 43 114 124
40 % 43 114 142
30 % 43 114 150
Entity #2 | Chains: D,E,F
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 520
95 % 10 15 623 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 11 19 560
70 % 55 85 136
50 % 44 65 203
40 % 44 65 219
30 % 44 65 228
Entity #3 | Chains: G
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 2233
95 % 9 13 2453 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.2
PDBFlex
90 % 9 13 2516
70 % 9 13 2596
50 % 11 18 2176
40 % 42 62 790
30 % 50 76 661
Entity #4 | Chains: H
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2047
95 % 9 13 2594 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 9 13 2687
70 % 9 13 2727
50 % 10 17 2383
40 % 10 17 2419
30 % 19 36 1346
Entity #5 | Chains: I
ATP SYNTHASE CATALYTIC SECTOR F1 EPSILON SUBUNIT protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 24721
95 % 10 14 2509 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 10 14 2575
70 % 10 14 2610
50 % 10 14 2627
40 % 10 14 2654
30 % 10 14 2635
Entity #6 | Chains: J,K,L,M,N,O,P,Q,R,S
ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 19 166
95 % 12 19 219 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 12 19 232
70 % 13 23 183
50 % 14 36 138
40 % 14 36 153
30 % 14 36 159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3ZIA 3 G, Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
2 3OEE 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
3 2HLD 3 G, P, Y ATP synthase gamma chain, mitochondrial 4932 7.1.2.2 | Details
4 3OEH 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
5 2XOK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
6 3OE7 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
7 3OFN 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
8 3FKS 3 G, P, Y ATP synthase subunit gamma, mitochondrial UNP residues 34-311 4932 7.1.2.2 | Details
9 5FL7 3 G ATP SYNTHASE SUBUNIT GAMMA CHAIN, MITOCHONDRIAL 4952 7.1.2.2 | Details
10 2WPD 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
11 3ZRY 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
12 6CP3 5 G ATP synthase subunit gamma, mitochondrial 4932
13 6CP6 5 G ATP synthase subunit gamma, mitochondrial 4932
14 6B8H 13 G, j ATP synthase subunit gamma, mitochondrial 4932
15 5LQX 7 G ATP synthase gamma subunit 870730
16 5LQY 7 G ATP synthase gamma subunit 870730
17 5LQZ 7 G ATP synthase gamma subunit 870730
18 4B2Q 5 G, g ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 34-311 4932