Sequence Similarity Clusters for the Entities in PDB 3ZRY

Entity #1 | Chains: A,B,C
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 614
95 % 10 15 620 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 10 15 653
70 % 42 63 174
50 % 43 114 123
40 % 43 114 143
30 % 43 114 148
Entity #2 | Chains: D,E,F
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 534
95 % 10 15 624 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 11 19 566
70 % 55 85 137
50 % 44 65 202
40 % 44 65 222
30 % 44 65 229
Entity #3 | Chains: G
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 2266
95 % 9 13 2552 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.2
PDBFlex
90 % 9 13 2624
70 % 9 13 2653
50 % 11 18 2213
40 % 42 62 798
30 % 50 76 661
Entity #4 | Chains: H
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2048
95 % 9 13 2622 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 9 13 2692
70 % 9 13 2733
50 % 10 17 2367
40 % 10 17 2383
30 % 19 36 1353
Entity #5 | Chains: I
ATP SYNTHASE CATALYTIC SECTOR F1 EPSILON SUBUNIT protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26408
95 % 10 14 2534 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 10 14 2598
70 % 10 14 2632
50 % 10 14 2636
40 % 10 14 2670
30 % 10 14 2652
Entity #6 | Chains: J,K,L,M,N,O,P,Q,R,S
ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 19 166
95 % 12 19 221 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 12 19 232
70 % 13 23 183
50 % 14 36 137
40 % 14 36 152
30 % 14 36 158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3ZIA 3 G, Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
2 3OEE 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
3 2HLD 3 G, P, Y ATP synthase gamma chain, mitochondrial 4932 7.1.2.2 | Details
4 3OEH 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
5 3OFN 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
6 3FKS 3 G, P, Y ATP synthase subunit gamma, mitochondrial UNP residues 34-311 4932 7.1.2.2 | Details
7 2WPD 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
8 3ZRY 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
9 6CP3 5 G ATP synthase subunit gamma, mitochondrial 4932
10 6CP6 5 G ATP synthase subunit gamma, mitochondrial 4932
11 6B8H 13 G, j ATP synthase subunit gamma, mitochondrial 4932
12 4B2Q 5 G, g ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 34-311 4932