Sequence Similarity Clusters for the Entities in PDB 3ZRY

Entity #1 | Chains: A,B,C
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 610
95 % 10 15 618 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 10 15 648
70 % 42 63 174
50 % 43 114 124
40 % 43 114 142
30 % 43 114 150
Entity #2 | Chains: D,E,F
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 520
95 % 10 15 623 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 11 19 560
70 % 55 85 136
50 % 44 65 203
40 % 44 65 219
30 % 44 65 228
Entity #3 | Chains: G
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 2233
95 % 9 13 2453 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.2
PDBFlex
90 % 9 13 2516
70 % 9 13 2596
50 % 11 18 2176
40 % 42 62 790
30 % 50 76 661
Entity #4 | Chains: H
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2047
95 % 9 13 2594 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 9 13 2687
70 % 9 13 2727
50 % 10 17 2383
40 % 10 17 2419
30 % 19 36 1346
Entity #5 | Chains: I
ATP SYNTHASE CATALYTIC SECTOR F1 EPSILON SUBUNIT protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 24721
95 % 10 14 2509 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 10 14 2575
70 % 10 14 2610
50 % 10 14 2627
40 % 10 14 2654
30 % 10 14 2635
Entity #6 | Chains: J,K,L,M,N,O,P,Q,R,S
ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 19 166
95 % 12 19 219 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 12 19 232
70 % 13 23 183
50 % 14 36 138
40 % 14 36 153
30 % 14 36 159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM RESIDUES 44-553 9913 7.1.2.2 | Details
2 2CK3 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 9913 7.1.2.2 | Details
3 1H8E 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
4 2V7Q 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM RESIDUES 44-553 9913 3.6.1.14 | Details
5 2JIZ 1 A, B, C, H, I, J ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM RESIDUES 44-553 9913 7.1.2.2 | Details
6 1W0J 1 A, B, C ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
7 2JJ2 1 A, B, C, H, I, J ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM RESIDUES 44-553 9913 7.1.2.2 | Details
8 1E79 1 A, B, C ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 9913 7.1.2.2 | Details
9 1E1R 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
10 3ZIA 1 A, B, C, K, L, M ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 4932
11 2JJ1 1 A, B, C, H, I, J ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM RESIDUES 44-553 9913 7.1.2.2 | Details
12 3OEE 1 A, B, C, J, K, L, S, T, U ATP synthase subunit alpha UNP RESIDUES 36-545 4932 7.1.2.2 | Details
13 1E1Q 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
14 2HLD 1 A, B, C, J, K, L, S, T, U ATP synthase alpha chain, mitochondrial 4932 7.1.2.2 | Details
15 1EFR 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT ALPHA 9913 7.1.2.2 | Details
16 1MAB 1 A PROTEIN (F1-ATPASE ALPHA CHAIN) ALPHA CHAIN 10116 7.1.2.2 | Details
17 4ASU 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 9913
18 1NBM 1 A, B, C F1-ATPASE 9913 7.1.2.2 | Details
19 1W0K 1 A, B, C ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
20 1OHH 1 A, B, C ATP synthase subunit alpha, mitochondrial 9913
21 3OEH 1 A, B, C, J, K, L, S, T, U ATP synthase subunit alpha UNP RESIDUES 36-545 4932 7.1.2.2 | Details
22 2XOK 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 4932
23 3OE7 1 A, B, C, J, K, L, S, T, U ATP synthase subunit alpha UNP RESIDUES 36-545 4932 7.1.2.2 | Details
24 1H8H 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
25 3OFN 1 A, B, C, J, K, L, S, T, U ATP synthase subunit alpha UNP RESIDUES 36-545 4932 7.1.2.2 | Details
26 4YXW 1 A, B, C ATP synthase subunit alpha, mitochondrial 9913
27 2WSS 1 A, B, C, J, K, L ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 9913
28 4TSF 1 A, B, C ATP synthase subunit alpha, mitochondrial 9913
29 4TT3 1 A, B, C ATP synthase subunit alpha, mitochondrial 9913
30 4Z1M 1 A, B, C ATP synthase subunit alpha, mitochondrial 9913
31 1COW 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
32 3FKS 1 A, B, C, J, K, L, S, T, U ATP synthase subunit alpha, mitochondrial UNP residues 36-545 4932 7.1.2.2 | Details
33 2F43 1 A ATP synthase alpha chain, mitochondrial 10116 7.1.2.2 | Details
34 2XND 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL RESIDUES 62-553 9913 7.1.2.2 | Details
35 5FL7 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA 4952
36 2WPD 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 4932
37 2W6J 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
38 2W6I 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
39 2W6H 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
40 2W6E 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
41 2W6G 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
42 3ZRY 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 4932
43 2W6F 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL 9913 7.1.2.2 | Details
44 6J5I 1 A, B, C ATP synthase subunit alpha, mitochondrial 9823
45 6J5J 1 A, B, C ATP synthase subunit alpha, mitochondrial 9823
46 6J5K 1 A, AA, AB, AC, B, BA, BB, BC, C, CA, CB, CC ATP synthase F1 subunit alpha 9823
47 6CP3 3 A, B, C ATP synthase subunit alpha, mitochondrial 4932
48 6CP6 3 A, B, C ATP synthase subunit alpha, mitochondrial 4932
49 6B8H 11 B, C, K, W, X, n ATP synthase subunit alpha, mitochondrial 4932
50 5LQX 5 A, B, C ATP synthase alpha subunit 870730
51 5LQY 5 A, B, C ATP synthase alpha subunit 870730
52 5LQZ 5 A, B, C ATP synthase alpha subunit 870730
53 5FIJ 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
54 5FIK 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
55 5FIL 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
56 5ARA 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
57 5ARE 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
58 5ARH 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
59 5ARI 1 A, B, C ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL UNP RESIDUES 44-553 9913
60 4B2Q 1 A, C, a, c ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL RESIDUES 61-545 4932
61 4B2Q 2 B, b ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL RESIDUES 60-545 4932
62 1QO1 1 A, B, C ATP SYNTHASE ALPHA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE ALPHA CHAIN HEART ISOFORM SEQUENCE (SWISSPROT P19483) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 7.1.2.2 | Details
63 1BMF 1 A, B, C BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details