Sequence Similarity Clusters for the Entities in PDB 3ZRY

Entity #1 | Chains: A,B,C
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 610
95 % 10 15 615 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 10 15 645
70 % 42 63 173
50 % 43 114 123
40 % 43 114 143
30 % 43 114 148
Entity #2 | Chains: D,E,F
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 511
95 % 10 15 617 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 11 19 548
70 % 55 85 136
50 % 44 65 203
40 % 44 65 218
30 % 44 65 228
Entity #3 | Chains: G
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 2238
95 % 9 13 2535 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.2
PDBFlex
90 % 9 13 2601
70 % 9 13 2620
50 % 11 18 2185
40 % 42 62 790
30 % 50 76 648
Entity #4 | Chains: H
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 2024
95 % 9 13 2592 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 9 13 2659
70 % 9 13 2684
50 % 10 17 2334
40 % 10 17 2361
30 % 19 36 1343
Entity #5 | Chains: I
ATP SYNTHASE CATALYTIC SECTOR F1 EPSILON SUBUNIT protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 24574
95 % 10 14 2487 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.8
PDBFlex
90 % 10 14 2551
70 % 10 14 2578
50 % 10 14 2590
40 % 10 14 2633
30 % 10 14 2605
Entity #6 | Chains: J,K,L,M,N,O,P,Q,R,S
ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 19 167
95 % 12 19 217 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 12 19 230
70 % 13 23 182
50 % 14 36 136
40 % 14 36 152
30 % 14 36 157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures