Sequence Similarity Clusters for the Entities in PDB 3WXG

Entity #1 | Chains: A,D
Uncharacterized protein protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41530
95 % 3 3 17596 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 3 3 17455
70 % 3 3 16102
50 % 3 3 14562
40 % 3 3 13531
30 % 3 3 12303
Entity #2 | Chains: B,E
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 20 1530
95 % 300 491 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 308 504 6
70 % 346 555 9
50 % 347 570 10
40 % 347 574 12
30 % 359 595 19
Entity #3 | Chains: C,F
Ubiquitin protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 240 393 4
95 % 301 491 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 309 504 6
70 % 347 555 9
50 % 348 570 10
40 % 348 574 12
30 % 360 595 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures