Sequence Similarity Clusters for the Entities in PDB 3WXF

Entity #1 | Chains: A,C
Uncharacterized protein protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51423
95 % 1 3 17037 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 3 16762
70 % 1 3 16118
50 % 1 3 14115
40 % 1 3 13123
30 % 1 3 12252
Entity #2 | Chains: B,D
Ubiquitin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 1451
95 % 9 19 1445 Flexibility: Medium
Max RMSD: 15.1, Avg RMSD: 7.3
PDBFlex
90 % 9 19 1465
70 % 9 19 1512
50 % 10 20 1512
40 % 10 20 1560
30 % 14 31 838

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures