Sequence Similarity Clusters for the Entities in PDB 3WDG

Entity #1 | Chains: A
Uracil-DNA glycosylase protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34699
95 % 2 2 26897 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 25286
70 % 2 2 23041
50 % 24 40 1134
40 % 24 41 1144
30 % 24 41 1189
Entity #2 | Chains: B
Uncharacterized protein protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 18944
95 % 2 3 18556 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 4 16100
70 % 2 4 15062
50 % 2 4 13628
40 % 2 4 12695
30 % 2 4 11597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures