Sequence Similarity Clusters for the Entities in PDB 3W5K

Entity #1 | Chains: A
Importin subunit beta-1 protein, length: 876 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12163
95 % 4 9 7505 Flexibility: Medium
Max RMSD: 12.5, Avg RMSD: 5.6
PDBFlex
90 % 4 9 7327
70 % 4 9 7340
50 % 4 9 6809
40 % 4 9 6700
30 % 8 15 3805
Entity #2 | Chains: B
Zinc finger protein SNAI1 protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81875
95 % 1 1 57504
90 % 1 1 54244
70 % 1 1 47253
50 % 1 1 40819
40 % 1 1 36906
30 % 1 1 32523

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures