Sequence Similarity Clusters for the Entities in PDB 3W4U

Entity #1 | Chains: A,C,E
Hemoglobin subunit zeta protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18308
95 % 1 2 17234 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 17678
70 % 1 2 15825
50 % 23 39 1055
40 % 27 44 943
30 % 382 831 11
Entity #2 | Chains: B,D,F
Hemoglobin subunit beta protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3408
95 % 138 278 33 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 140 282 37
70 % 168 373 18
50 % 352 782 6
40 % 352 782 7
30 % 383 831 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures