Sequence Similarity Clusters for the Entities in PDB 3VYP

Entity #1 | Chains: A,B
Probable conserved lipoprotein LPPS protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2483
95 % 1 15 2161 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 1 15 2250
70 % 1 15 2282
50 % 1 15 2347
40 % 1 15 2349
30 % 1 15 2359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures