Sequence Similarity Clusters for the Entities in PDB 3VMP

Entity #1 | Chains: A
Dextranase protein, length: 643 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 31865
95 % 3 3 26831 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 25929
70 % 3 3 23556
50 % 3 3 20739
40 % 3 3 18948
30 % 3 3 16975

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures