Sequence Similarity Clusters for the Entities in PDB 3V1A

Entity #1 | Chains: A
Computational design, MID1-apo1 protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 5311
95 % 1 6 4375 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.9
PDBFlex
90 % 1 6 4434
70 % 1 7 4189
50 % 1 7 4102
40 % 1 7 4033
30 % 1 7 3949

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3V1A 1 A Computational design, MID1-apo1 32630
2 3V1E 1 A, B Computational design, MID1-zinc H12E mutant 32630
3 3V1C 1 A, B Computational design, MID1-zinc 32630
4 3V1F 1 A, B Computational design, MID1-zinc H35E mutant 32630
5 3V1D 1 A, B, C, D, E, F, G, H Computational design, MID1-cobalt 32630
6 3V1B 1 A, B Computational design, MID1-apo2 32630