Sequence Similarity Clusters for the Entities in PDB 3V1A

Entity #1 | Chains: A
Computational design, MID1-apo1 protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 5208
95 % 1 6 4441 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.9
PDBFlex
90 % 1 6 4509
70 % 1 7 4198
50 % 1 7 4093
40 % 1 7 4029
30 % 1 7 3940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3V1A 1 A Computational design, MID1-apo1 32630
2 3V1E 1 A, B Computational design, MID1-zinc H12E mutant 32630
3 3V1C 1 A, B Computational design, MID1-zinc 32630
4 3V1F 1 A, B Computational design, MID1-zinc H35E mutant 32630
5 3V1D 1 A, B, C, D, E, F, G, H Computational design, MID1-cobalt 32630
6 3V1B 1 A, B Computational design, MID1-apo2 32630