Sequence Similarity Clusters for the Entities in PDB 3UT5

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 94 166 43
95 % 96 260 13 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 96 261 15
70 % 96 277 13
50 % 96 277 17
40 % 192 554 3
30 % 194 565 8
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 5746
95 % 96 256 14 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 97 269 8
70 % 97 277 12
50 % 97 277 16
40 % 193 554 3
30 % 195 565 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 7035
95 % 81 118 451 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 81 118 480
70 % 81 118 511
50 % 81 118 538
40 % 81 118 579
30 % 81 118 595
Entity #4 | Chains: F
Vinca tetrapeptide protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures