Sequence Similarity Clusters for the Entities in PDB 3UPE

Entity #1 | Chains: A
Cationic trypsin protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26734
95 % 186 483 32 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.4
PDBFlex
90 % 186 483 36
70 % 202 573 20
50 % 206 589 35
40 % 247 910 10
30 % 401 1956 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures