Sequence Similarity Clusters for the Entities in PDB 3UIR

Entity #1 | Chains: A,B
Plasmin light chain B protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 8203
95 % 12 14 3076 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 12 14 3149
70 % 12 14 3188
50 % 12 14 3150
40 % 851 908 11
30 % 1804 1948 6
Entity #2 | Chains: C,D
Textilinin-1 protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8702
95 % 4 4 9376 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 4 4 9296
70 % 4 4 9431
50 % 7 13 4012
40 % 135 161 197
30 % 142 168 197

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures