Sequence Similarity Clusters for the Entities in PDB 3UG9

Entity #1 | Chains: A
Archaeal-type opsin 1, Archaeal-type opsin 2 protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68871
95 % 1 4 20287 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 4 17601
70 % 1 6 9260
50 % 1 7 7418
40 % 1 7 7152
30 % 1 7 6682

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3UG9 1 A Archaeal-type opsin 1, Archaeal-type opsin 2 chimera protein of Archaeal-type opsin 1 (UNP residues 24-245) and Archaeal-type opsin 2 (UNP residues 207-309) from Chlamydomonas reinhardtii 3055
2 4YZI 1 A Sensory opsin A,Archaeal-type opsin 2 The fusion protein of Sensory opsin A (39-245) and Archaeal-type opsin 2 (207-303) UNP RESIDUES 39-245,UNP RESIDUES 207-303 3055
3 6CSN 1 A iC++ 3055
4 6CSO 1 A iC++ 3055