Sequence Similarity Clusters for the Entities in PDB 3UFX

Entity #1 | Chains: A,D,F,H
succinyl-CoA synthetase alpha subunit protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27120
95 % 2 2 17184 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 2 16867
70 % 2 2 15818
50 % 4 4 10748
40 % 4 4 10122
30 % 4 4 9345
Entity #2 | Chains: B,E,G,I
Succinyl-CoA synthetase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24634
95 % 1 1 23341 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22658
70 % 1 1 20774
50 % 1 1 18757
40 % 13 23 1711
30 % 13 23 1735

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3UFX 2 B, E, G, I Succinyl-CoA synthetase beta subunit 271 6.2.1 | Details