Sequence Similarity Clusters for the Entities in PDB 3UFX

Entity #1 | Chains: A,D,F,H
succinyl-CoA synthetase alpha subunit protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27120
95 % 2 2 17184 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 2 16867
70 % 2 2 15818
50 % 4 4 10748
40 % 4 4 10122
30 % 4 4 9345
Entity #2 | Chains: B,E,G,I
Succinyl-CoA synthetase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24634
95 % 1 1 23341 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22658
70 % 1 1 20774
50 % 1 1 18757
40 % 13 23 1711
30 % 13 23 1735

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6MGG 2 B, D Succinate--CoA ligase [ADP-forming] subunit beta 263 6.2.1.5 | Details
2 6MEL 2 B Succinate--CoA ligase [ADP-forming] subunit beta 197 6.2.1.5 | Details
3 1EUD 2 B SUCCINYL-COA SYNTHETASE, BETA CHAIN 9823 6.2.1.4 | Details
4 1EUC 2 B SUCCINYL-COA SYNTHETASE, BETA CHAIN 9823 6.2.1.4 | Details
5 4XX0 2 B Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial UNP residues 40-433 9823 6.2.1.4 | Details
6 5CAE 2 B Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial UNP residues 40-433 9823 6.2.1.4 | Details
7 2FP4 2 B Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial 9823 6.2.1.4 | Details
8 2NU8 2 B, E Succinyl-CoA synthetase beta chain 562 6.2.1.5 | Details
9 2NU7 2 B, E Succinyl-CoA synthetase beta chain 562 6.2.1.5 | Details
10 2SCU 2 B, E PROTEIN (SUCCINYL-COA LIGASE) RESIDUES A246 AND D246 ARE PHOSPHOHISTIDINES 562 6.2.1.5 | Details
11 1JKJ 2 B, E succinyl-CoA synthetase beta subunit 562 6.2.1.5 | Details
12 2FPP 2 B Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial 9823 6.2.1.4 | Details
13 3UFX 2 B, E, G, I Succinyl-CoA synthetase beta subunit 271 6.2.1 | Details
14 2NU6 2 B, E Succinyl-CoA synthetase beta chain 562 6.2.1.5 | Details
15 1SCU 2 B, E SUCCINYL-COA SYNTHETASE, BETA SUBUNIT 562 6.2.1.5 | Details
16 6G4Q 2 B Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 9606 6.2.1.5 | Details
17 1CQJ 2 B, E SUCCINYL-COA SYNTHETASE BETA CHAIN BETA SUBUNIT 562 6.2.1.5 | Details
18 2FPI 2 B Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial 9823 6.2.1.4 | Details
19 1JLL 2 B, E succinyl-CoA synthetase beta subunit 562 6.2.1.5 | Details
20 2FPG 2 B Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial 9823 6.2.1.4 | Details
21 2NU9 2 B, E, G, I Succinyl-CoA synthetase beta chain 562 6.2.1.5 | Details
22 2NUA 2 B, E Succinyl-CoA synthetase beta chain 562 6.2.1.5 | Details
23 1CQI 2 B, E PROTEIN (SUCCINYL-COA SYNTHETASE BETA CHAIN) BETA SUBUNIT 562 6.2.1.5 | Details