Sequence Similarity Clusters for the Entities in PDB 3UFX

Entity #1 | Chains: A,D,F,H
succinyl-CoA synthetase alpha subunit protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27192
95 % 2 2 17208 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 2 15935
70 % 2 2 15826
50 % 4 4 10764
40 % 4 4 10145
30 % 4 4 9345
Entity #2 | Chains: B,E,G,I
Succinyl-CoA synthetase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27193
95 % 1 1 23374 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 17527
70 % 1 1 16341
50 % 1 1 18382
40 % 13 23 1706
30 % 13 23 1737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OI7 1 A SUCCINYL-COA SYNTHETASE ALPHA CHAIN 274 6.2.1.4 | Details
2 3UFX 1 A, D, F, H succinyl-CoA synthetase alpha subunit 271 6.2.1.4 | Details