Sequence Similarity Clusters for the Entities in PDB 3UFX

Entity #1 | Chains: A,D,F,H
succinyl-CoA synthetase alpha subunit protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26990
95 % 2 2 17184 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 2 16893
70 % 2 2 15705
50 % 4 4 10697
40 % 4 4 10070
30 % 4 4 9299
Entity #2 | Chains: B,E,G,I
Succinyl-CoA synthetase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20672
95 % 1 1 23278 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22583
70 % 1 1 20720
50 % 1 1 18311
40 % 13 23 1694
30 % 13 23 1723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures