Sequence Similarity Clusters for the Entities in PDB 3U2E

Entity #1 | Chains: A,B
GGDEF family protein protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 33163
95 % 2 2 25529 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 2 2 24685
70 % 2 2 22521
50 % 2 2 19837
40 % 2 2 18162
30 % 2 3 11792
Entity #2 | Chains: C,D
RNA (5'-R(P*GP*G)-3') rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures