Sequence Similarity Clusters for the Entities in PDB 3TMK

Entity #1 | Chains: A,B,C,D,E,F,G,H
THYMIDYLATE KINASE protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 6562
95 % 2 3 6631 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 2 3 6641
70 % 2 3 6542
50 % 2 4 5748
40 % 6 11 2256
30 % 6 11 2255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures