Sequence Similarity Clusters for the Entities in PDB 3SR2

Entity #1 | Chains: A,B,E,F
DNA repair protein XRCC4 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23227
95 % 1 1 22756 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 25289
70 % 1 1 20284
50 % 1 1 18010
40 % 1 1 16569
30 % 1 1 14963
Entity #2 | Chains: C,D,G,H
Non-homologous end-joining factor 1 protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2050
95 % 5 6 2620 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.6
PDBFlex
90 % 5 6 2685
70 % 5 6 2720
50 % 5 6 2741
40 % 5 6 2763
30 % 5 6 2749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures