Sequence Similarity Clusters for the Entities in PDB 3SNB

Entity #1 | Chains: A
3C-like proteinase protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 54 64 492
95 % 153 176 220 Flexibility: Low
Max RMSD: 16.9, Avg RMSD: 2.1
PDBFlex
90 % 153 176 230
70 % 153 176 258
50 % 168 194 207
40 % 184 216 181
30 % 184 216 189
Entity #2 | Chains: H
Peptide aldehyde inhibitor Ac-DSFDQ-H protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures