Sequence Similarity Clusters for the Entities in PDB 3SJL

Entity #1 | Chains: A,B
Methylamine utilization protein mauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52041
95 % 1 28 1137 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 1 28 1167
70 % 1 28 1197
50 % 1 28 1228
40 % 1 28 1273
30 % 1 28 1315
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 37 499
95 % 1 40 658 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 1 40 690
70 % 1 40 720
50 % 1 40 753
40 % 1 40 783
30 % 1 40 823
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 34 593
95 % 1 37 684 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 37 713
70 % 1 38 729
50 % 1 38 764
40 % 1 42 750
30 % 1 42 793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures