Sequence Similarity Clusters for the Entities in PDB 3S9D

Entity #1 | Chains: A,C
Interferon alpha-2 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39462
95 % 1 10 2922 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.0
PDBFlex
90 % 1 10 2992
70 % 1 11 2744
50 % 1 14 2469
40 % 1 14 2524
30 % 1 14 2490
Entity #2 | Chains: B,D
Interferon alpha/beta receptor 2 protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8374
95 % 1 8 9414 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 1 8 9377
70 % 1 8 9132
50 % 1 8 8517
40 % 1 8 8180
30 % 1 8 7627

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures