Sequence Similarity Clusters for the Entities in PDB 3RYH

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 84 164 42
95 % 86 256 12 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 86 257 15
70 % 86 272 13
50 % 86 272 18
40 % 172 544 4
30 % 174 553 8
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 5420
95 % 86 252 13 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 87 264 8
70 % 87 272 12
50 % 87 272 17
40 % 173 544 4
30 % 175 553 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 6926
95 % 74 118 443 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 74 118 464
70 % 74 118 495
50 % 74 118 526
40 % 74 118 566
30 % 74 118 590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 5YL2 1 A, C Tubulin alpha-1B chain 9823
36 4O4L 1 A, C Tubulin alpha-1B chain 9913
37 5LXS 1 A, C Tubulin alpha-1B chain 9913
38 5JQG 1 A, C Tubulin alpha-1B chain 9823
39 5JH7 1 A, C Tubulin alpha-1B chain 9913
40 5J2T 1 A, C Tubulin alpha-1B chain 9913
41 5XKG 1 A, C Tubulin alpha-1B chain 9823
42 5JCB 1 A, C Tubulin alpha-1B chain 9823
43 4O2B 1 A, C Tubulin alpha-1B chain 9913
44 4O4J 1 A, C Tubulin alpha-1B chain 9913
45 5MF4 1 A, C Tubulin alpha-1B chain 9913
46 3RYI 1 A, C Tubulin alpha chain 9940
47 5CB4 1 A, C Tubulin alpha 41807
48 5JVD 1 A, C Tubulin alpha-1B chain 9913
49 5XKH 1 A, C Tubulin alpha-1B chain 9823
50 6FII 1 A, C Tubulin alpha-1B chain 9913
51 6O5M 1 A, C Tubulin alpha-1B chain 9823
52 5XP3 1 A, C Tubulin alpha-1B chain 9823
53 4I50 1 A, C Tubulin alpha-1B chain 9913
54 6BR1 1 A, C Tubulin alpha-1B chain 9823
55 6QQN 1 A, C Tubulin alpha-1B chain 9913
56 3RYF 1 A, C Tubulin alpha chain 9940
57 4O4I 1 A, C Tubulin alpha-1B chain 9913
58 5LOV 1 A, C Tubulin alpha-1B chain 9913
59 5LYJ 1 A, C Tubulin alpha-1B chain 9913
60 5OV7 1 A, C Tubulin alpha-1B chain 9913
61 6NNG 1 A, C Tubulin alpha-1B chain 9823
62 5CA1 1 A, C Tubulin alpha 41807
63 4ZOL 1 A, C Tubulin alpha-1B chain 9823
64 5XLZ 1 A, C Tubulin alpha-1B chain 9913
65 6HX8 1 A, C Tubulin alpha-1B chain 9913
66 6GJ4 1 A, C Tubulin alpha-1B chain 9913
67 6GF3 1 A, C Tubulin alpha-1B chain 9913
68 4ZI7 1 A, C Tubulin alpha-1B chain 9823
69 6FJF 1 A, C Tubulin alpha-1B chain 9913
70 5BMV 1 A, C Tubulin alpha-1B chain 9913
71 6BRF 1 A, C Tubulin alpha-1B chain 9823
72 6EG5 1 A, C Tubulin alpha-1B chain 9823
73 6GWC 1 A ALPHA-TUBULIN 9940
74 4O2A 1 A, C Tubulin alpha-1B chain 9913
75 4F6R 1 A Tubulin alpha chain 9940
76 5KX5 1 A, C Tubulin alpha chain 9940
77 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
78 5CA0 1 A, C Tubulin alpha-1B chain 9823
79 5NJH 1 A, C Tubulin alpha-1B chain 9913
80 5O7A 1 A, C Tubulin alpha-1B chain 9913
81 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
82 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
83 6BS2 1 A, C Tubulin alpha-1B chain 9823
84 4YJ2 1 A, C Tubulin alpha-1B chain 9913
85 6H9B 1 A, C Tubulin alpha chain 9940
86 3RYH 1 A, C Tubulin alpha chain 9940
87 4IIJ 1 A, C Tubulin alpha-1B chain 9913
88 5XAF 1 A, C Tubulin alpha-1B chain 9913
89 5J2U 1 A, C Tubulin alpha-1B chain 9913
90 6KNZ 1 A, C Tubulin alpha-1B chain 9913
91 5YZ3 1 A, C Tubulin alpha-1B chain 9913
92 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
93 6N47 1 A, C Tubulin alpha-1B chain 9823
94 3UT5 1 A, C Tubulin alpha chain 9940
95 6O61 1 A, C Tubulin alpha-1B chain 9823
96 5XAG 1 A, C Tubulin alpha-1B chain 9913
97 6GVN 1 A Tubulin alpha chain 9940
98 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
99 6BRY 1 A, C Tubulin alpha-1B chain 9823
100 6K9V 1 A, C Tubulin alpha-1B chain 9913
101 6I5C 1 A, C Tubulin alpha-1B chain 9913
102 5XKE 1 A, C Tubulin alpha-1B chain 9823
103 5C8Y 1 A, C Tubulin alpha 41807
104 5YL4 1 A, C Tubulin alpha chain 41807
105 6JCJ 1 A, C Tubulin alpha-1B chain 9823
106 6D88 1 A, C Tubulin alpha-1B chain 9823
107 5YLJ 1 A, C Tubulin alpha-1B chain 9823
108 5XLT 1 A, C Tubulin alpha-1B chain 9913
109 5ZXH 1 A, C Tubulin alpha-1B chain 9823
110 5XKF 1 A, C Tubulin alpha-1B chain 9823
111 6AGK 1 A, C Tubulin alpha-1B chain 9823
112 5H7O 1 A, C Tubulin alpha-1B chain 9823
113 5XIW 1 A, C Tubulin alpha-1B chain 9823
114 6GX7 1 A, C Tubulin alpha chain 9940
115 4HNA 1 A Tubulin alpha chain 9940
116 5XHC 1 A, C Tubulin alpha chain 41807
117 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
118 6O5N 1 A, C Tubulin alpha-1B chain 9823
119 4X1I 1 A, C Tubulin alpha chain 9940
120 5XI5 1 A, C Tubulin alpha chain 41807
121 5Z4U 1 A, C Tubulin alpha-1B chain 9823
122 5YLS 1 A, C Tubulin alpha-1B chain 9823
123 4X1Y 1 A, C Tubulin alpha chain 9940
124 5XI7 1 A, C Tubulin alpha chain 41807
125 4X20 1 A, C Tubulin alpha chain 9940
126 5MIO 1 A Tubulin alpha-1B chain 9913
127 4X1K 1 A, C Tubulin alpha chain 9940
128 6GWD 1 A, C, E ALPHA-TUBULIN 9940
129 4EB6 1 A, C Tubulin alpha chain 9940
130 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
131 5LP6 1 A, C Tubulin alpha-1B chain 9913
132 3HKE 1 A, C Tubulin alpha chain 9940
133 3HKB 1 A, C Tubulin alpha chain 9940
134 3HKD 1 A, C Tubulin alpha chain 9940
135 3HKC 1 A, C Tubulin alpha chain 9940
136 1SA0 1 A, C Tubulin alpha chain 9913
137 6BBN 1 A, C Tubulin alpha-1B chain 9913
138 3N2G 1 A, C Tubulin alpha chain 9940
139 6GVM 1 A Tubulin alpha chain 9940
140 3E22 1 A, C Tubulin alpha-1C chain 9913
141 1SA1 1 A, C Tubulin alpha chain 9913
142 1Z2B 1 A, C Tubulin alpha chain 9913
143 3DU7 1 A, C Tubulin alpha-1C chain 9913
144 3N2K 1 A, C Tubulin alpha chain 9940
145 4YJ3 1 A, C Tubulin alpha-1B chain 9913
146 4F61 1 A, C, E, G Tubulin alpha chain 9940
147 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
148 1FFX 1 A, C PROTEIN (TUBULIN) 9913
149 6RZA 2 A, C Tubulin alpha-1B chain 9823
150 6RZB 1 A Tubulin alpha-1B chain 9823
151 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
152 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
153 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
154 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
155 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
156 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
157 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
158 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
159 6I2I 1 A Tubulin alpha-1B chain 9606
160 6MLQ 1 A Tubulin alpha-1A chain 9823
161 6MLR 1 A Tubulin alpha-1A chain 9823
162 6E7B 2 A Tubulin alpha-1B chain 9606
163 6E7C 2 A Tubulin alpha-1B chain 9606
164 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
165 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
166 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
167 6CVJ 1 A Tubulin alpha-1B chain 9823
168 6CVN 2 B Tubulin alpha-1B chain 9823
169 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
170 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
171 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
172 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
173 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
174 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
175 6B0C 1 A, C Tubulin alpha-1B chain 9823
176 6B0I 1 A Tubulin alpha-1B chain 9823
177 6B0L 1 A Tubulin alpha-1B chain 9823
178 5OGC 2 A Tubulin alpha chain 9913
179 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
180 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
181 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
182 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
183 5OCU 2 A Tubulin alpha chain 9913
184 5OAM 2 A Tubulin alpha chain 9913
185 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
186 5ND3 2 A Tubulin alpha chain 9913
187 5ND4 2 A Tubulin alpha chain 9913
188 5ND7 2 A Tubulin alpha chain 9913
189 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
190 5MM4 2 A Tubulin alpha-1A chain 9823
191 5MM7 2 A Tubulin alpha-1A chain 9823
192 5M5N 1 A Tubulin alpha-1D chain 9913
193 5M5O 1 A Tubulin alpha-1D chain 9913
194 5M5C 2 A, D Tubulin alpha chain 9913
195 5M5I 1 A Tubulin alpha-1D chain 9913
196 5M5L 1 A Tubulin alpha-1D chain 9913
197 5M5M 1 A Tubulin alpha-1D chain 9913
198 5M50 1 A, D Tubulin alpha chain 9913
199 5M54 2 A, D Tubulin alpha chain 9913
200 5SYF 1 A Tubulin alpha chain 9823
201 5SYG 1 A Tubulin alpha chain 9823
202 5SYC 1 A Tubulin alpha chain 9823
203 5SYE 1 A Tubulin alpha chain 9823
204 5KMG 1 A Tubulin alpha-1B chain 9823
205 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
206 5IJ0 1 A Tubulin alpha-1B chain 9606
207 5IJ9 1 A Tubulin alpha-1B chain 9606
208 5HNW 1 A Tubulin alpha-1B chain 9913
209 5HNX 1 A Tubulin alpha-1B chain 9913
210 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
211 5HNZ 1 A Tubulin alpha-1B chain 9913
212 3JAW 1 A, C Tubulin alpha-1B chain 9823
213 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
214 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
215 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
216 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
217 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
218 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
219 3J8X 2 A Tubulin alpha-1B chain 9823
220 3J8Y 2 A Tubulin alpha-1B chain 9823
221 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
222 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
223 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
224 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
225 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
226 4UXY 1 A ALPHA TUBULIN 9913
227 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
228 3J7I 1 A Tubulin alpha-1A chain 9823
229 3J6P 2 A Tubulin alpha-1A chain 9823
230 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
231 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
232 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
233 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
234 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
235 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
236 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
237 3J2U 2 A, C Tubulin alpha-1A chain 9913
238 3J1T 2 B Tubulin alpha-1B chain 9913
239 3J1U 2 B Tubulin alpha-1B chain 9913
240 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
241 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
242 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
243 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
244 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
245 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
246 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
247 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
248 3EDL 1 A Alpha-tubulin 9913
249 3EDL 4 F Alpha-tubulin 9913
250 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
251 2P4N 2 A Tubulin alpha chain 9823
252 2HXF 1 A Tubulin alpha chain 9823
253 2HXH 1 A Tubulin alpha chain 9823
254 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
255 1JFF 1 A tubulin alpha chain 9913
256 1IA0 1 A TUBULIN ALPHA CHAIN 9823
257 1TUB 1 A TUBULIN 9823