Sequence Similarity Clusters for the Entities in PDB 3RYC

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 156 43
95 % 10 248 12 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 10 249 15
70 % 10 263 21
50 % 10 263 41
40 % 19 526 8
30 % 19 534 11
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 5357
95 % 10 245 13 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 10 255 13
70 % 10 263 20
50 % 10 263 39
40 % 20 526 8
30 % 20 534 11
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 6593
95 % 8 116 427 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 8 116 457
70 % 8 116 491
50 % 8 116 520
40 % 8 116 562
30 % 8 116 585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures