Sequence Similarity Clusters for the Entities in PDB 3QYM

Entity #1 | Chains: A,B,C,D,E,F,G,H
Tumor protein 63 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2062
95 % 4 5 2647 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 4 5 2708
70 % 11 16 830
50 % 127 135 144
40 % 127 135 159
30 % 127 135 164
Entity #2 | Chains: I,J,K,L,M,N,O,P
5'-D(*AP*AP*AP*CP*AP*TP*GP*TP*TP*T)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures