Sequence Similarity Clusters for the Entities in PDB 3QG5

Entity #1 | Chains: A,B
rad50 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 9818
95 % 4 4 8880 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 3.5
PDBFlex
90 % 4 4 8825
70 % 4 4 8637
50 % 4 4 8064
40 % 4 4 7741
30 % 4 4 7232
Entity #2 | Chains: C,D
Mre11 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46696
95 % 2 2 26805 Flexibility: High
Max RMSD: 15.3, Avg RMSD: 10.6
PDBFlex
90 % 2 2 25916
70 % 2 2 23606
50 % 2 2 20742
40 % 2 2 18977
30 % 2 2 17020

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures