Sequence Similarity Clusters for the Entities in PDB 3QEF

Entity #1 | Chains: A,B
Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45842
95 % 2 3 11990 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 2 3 11808
70 % 2 3 11270
50 % 2 3 10316
40 % 2 3 9736
30 % 14 16 1817

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures