Sequence Similarity Clusters for the Entities in PDB 3QAZ

Entity #1 | Chains: A,D,G,J,M,P,S,V,Y,b,e,h
Interleukin-2 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3350
95 % 20 21 1228 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 20 21 1267
70 % 21 22 1259
50 % 21 22 1298
40 % 21 22 1338
30 % 21 22 1374
Entity #2 | Chains: B,E,H,K,N,Q,T,W,Z,c,f,i
Interleukin-2 receptor subunit beta protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5380
95 % 5 5 4720 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 5 4784
70 % 5 5 4831
50 % 6 6 4486
40 % 6 6 4410
30 % 6 6 4279
Entity #3 | Chains: C,F,I,L,O,R,U,X,a,d,g,j
Cytokine receptor common subunit gamma protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6173
95 % 6 6 4433 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 6 6 4494
70 % 7 7 4315
50 % 7 7 4208
40 % 7 7 4160
30 % 7 7 4050

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GS7 3 C Cytokine receptor common subunit gamma 9606
2 2B5I 3 C Cytokine receptor common gamma chain 9606
3 6OEL 3 C Cytokine receptor common subunit gamma UNP residues 61-249 9606
4 3BPL 3 C Cytokine receptor common gamma chain Extracellular domain, residues 56-254 9606
5 3QB7 2 C, D Cytokine receptor common subunit gamma UNP residues 55-254 9606
6 3QAZ 3 C, F, I, L, O, R, U, X, a, d, g, j Cytokine receptor common subunit gamma unp residues 56-254 9606