Sequence Similarity Clusters for the Entities in PDB 3QAZ

Entity #1 | Chains: A,D,G,J,M,P,S,V,Y,b,e,h
Interleukin-2 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3360
95 % 20 21 1229 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 20 21 1267
70 % 21 22 1258
50 % 21 22 1301
40 % 21 22 1346
30 % 21 22 1383
Entity #2 | Chains: B,E,H,K,N,Q,T,W,Z,c,f,i
Interleukin-2 receptor subunit beta protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5084
95 % 5 5 4802 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 5 4855
70 % 5 5 4793
50 % 6 6 4492
40 % 6 6 4397
30 % 6 6 4271
Entity #3 | Chains: C,F,I,L,O,R,U,X,a,d,g,j
Cytokine receptor common subunit gamma protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6128
95 % 6 6 4451 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 6 6 4503
70 % 7 7 4311
50 % 7 7 4209
40 % 7 7 4148
30 % 7 7 4058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GS7 3 C Cytokine receptor common subunit gamma 9606
2 2B5I 3 C Cytokine receptor common gamma chain 9606
3 6DG5 3 C Cytokine receptor common subunit gamma 10090
4 6OEL 3 C Cytokine receptor common subunit gamma UNP residues 61-249 9606
5 3BPL 3 C Cytokine receptor common gamma chain Extracellular domain, residues 56-254 9606
6 3QB7 2 C, D Cytokine receptor common subunit gamma UNP residues 55-254 9606
7 3QAZ 3 C, F, I, L, O, R, U, X, a, d, g, j Cytokine receptor common subunit gamma unp residues 56-254 9606