Sequence Similarity Clusters for the Entities in PDB 3QAZ

Entity #1 | Chains: A,D,G,J,M,P,S,V,Y,b,e,h
Interleukin-2 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3190
95 % 20 21 1249 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 20 21 1265
70 % 21 22 1268
50 % 21 22 1296
40 % 21 22 1339
30 % 21 22 1369
Entity #2 | Chains: B,E,H,K,N,Q,T,W,Z,c,f,i
Interleukin-2 receptor subunit beta protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5113
95 % 5 5 4725 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 5 4793
70 % 5 5 4826
50 % 6 6 4494
40 % 6 6 4412
30 % 6 6 4278
Entity #3 | Chains: C,F,I,L,O,R,U,X,a,d,g,j
Cytokine receptor common subunit gamma protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6180
95 % 6 6 4517 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 6 6 4575
70 % 7 7 4326
50 % 7 7 4217
40 % 7 7 4163
30 % 7 7 4058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4GS7 2 B Interleukin-2 receptor subunit beta 9606
2 5M5E 1 B Interleukin-2 receptor subunit beta 9606
3 2B5I 2 B Interleukin-2 receptor beta chain 9606
4 2ERJ 2 B, F Interleukin-2 receptor beta chain 9606
5 3QAZ 2 B, E, H, K, N, Q, T, W, Z, c, f, i Interleukin-2 receptor subunit beta unp residues 24-240 9606