Sequence Similarity Clusters for the Entities in PDB 3QAZ

Entity #1 | Chains: A,D,G,J,M,P,S,V,Y,b,e,h
Interleukin-2 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3360
95 % 20 21 1229 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 20 21 1267
70 % 21 22 1258
50 % 21 22 1301
40 % 21 22 1346
30 % 21 22 1383
Entity #2 | Chains: B,E,H,K,N,Q,T,W,Z,c,f,i
Interleukin-2 receptor subunit beta protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5084
95 % 5 5 4802 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 5 4855
70 % 5 5 4793
50 % 6 6 4492
40 % 6 6 4397
30 % 6 6 4271
Entity #3 | Chains: C,F,I,L,O,R,U,X,a,d,g,j
Cytokine receptor common subunit gamma protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6128
95 % 6 6 4451 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 6 6 4503
70 % 7 7 4311
50 % 7 7 4209
40 % 7 7 4148
30 % 7 7 4058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4ZF7 1 A, B Interleukin 2 9668
2 5LQB 1 A Interleukin-2 9606
3 1M48 1 A, B interleukin-2 9606
4 4NEJ 1 A Interleukin-2 9606
5 4NEM 1 A Interleukin-2 9606
6 1M47 1 A interleukin-2 9606
7 1M49 1 A, B interleukin-2 9606
8 1NBP 1 A Interleukin-2 9606
9 1M4B 1 A interleukin-2 9606
10 2B5I 1 A Interleukin-2 9606
11 3INK 1 C, D INTERLEUKIN-2 9606
12 1M4A 1 A interleukin-2 9606
13 5UTZ 3 A, D, E, I Interleukin-2 9606
14 1M4C 1 A, B interleukin-2 9606
15 1PW6 1 A, B Interleukin-2 9606
16 1Z92 1 A Interleukin-2 9606
17 2ERJ 4 D, H Interleukin-2 9606
18 1QVN 1 A, B, C, D Interleukin-2 9606
19 3QB1 1 A, B, C, D, E, F, G, H Interleukin-2 9606
20 1PY2 1 A, B, C, D Interleukin-2 9606
21 3QAZ 1 A, D, G, J, M, P, S, V, Y, b, e, h Interleukin-2 unp residues 21-153 9606
22 1IRL 1 A INTERLEUKIN-2 9606