Sequence Similarity Clusters for the Entities in PDB 3QAZ

Entity #1 | Chains: A,D,G,J,M,P,S,V,Y,b,e,h
Interleukin-2 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3156
95 % 20 21 1219 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 20 21 1244
70 % 21 22 1249
50 % 21 22 1288
40 % 21 22 1335
30 % 21 22 1347
Entity #2 | Chains: B,E,H,K,N,Q,T,W,Z,c,f,i
Interleukin-2 receptor subunit beta protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5033
95 % 5 5 4676 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 5 4741
70 % 5 5 4779
50 % 6 6 4437
40 % 6 6 4354
30 % 6 6 4246
Entity #3 | Chains: C,F,I,L,O,R,U,X,a,d,g,j
Cytokine receptor common subunit gamma protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 6102
95 % 6 6 4452 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 6 6 4519
70 % 7 7 4274
50 % 7 7 4168
40 % 7 7 4119
30 % 7 7 4029

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures