3Q16

Linkage between the Bacterial Acid Stress and Stringent Responses: The Structure of the Inducible Lysine Decarboxylase


Sequence Similarity Clusters for the Entities in PDB 3Q16

Entity #1 | Chains: A,B,C,D,E
Lysine decarboxylase, inducible protein, length: 715 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 924
95 % 2 8 1245
90 % 2 8 1281
70 % 2 8 1308
50 % 2 9 1332
40 % 2 9 1377
30 % 4 11 1337

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3N75 1 A, B, C, D, E Lysine decarboxylase, inducible 562 4.1.1.18 | Details
2 3Q16 1 A, B, C, D, E Lysine decarboxylase, inducible 562 4.1.1.18 | Details
3 6Q7L 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T Inducible lysine decarboxylase 562 4.1.1.18 | Details
4 6Q7M 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T Inducible lysine decarboxylase 562 4.1.1.18 | Details
5 5FL2 1 A LYSINE DECARBOXYLASE, INDUCIBLE 562 4.1.1.18 | Details
6 5FKX 1 A LYSINE DECARBOXYLASE, INDUCIBLE 562 4.1.1.18 | Details
7 4UPF 1 A LYSINE DECARBOXYLASE, INDUCIBLE 562 4.1.1.18 | Details
8 4UPB 1 A, B LYSINE DECARBOXYLASE, INDUCIBLE 562 4.1.1.18 | Details