Sequence Similarity Clusters for the Entities in PDB 3Q16

Entity #1 | Chains: A,B,C,D,E
Lysine decarboxylase, inducible protein, length: 715 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 899
95 % 2 8 1222 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 8 1252
70 % 2 8 1293
50 % 2 9 1312
40 % 2 9 1355
30 % 4 11 1319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures