Sequence Similarity Clusters for the Entities in PDB 3PT2

Entity #1 | Chains: A
RNA polymerase protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 3945
95 % 7 10 4752 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 7 10 4815
70 % 7 10 4805
50 % 7 10 4683
40 % 7 10 4573
30 % 7 10 4439
Entity #2 | Chains: B
Ubiquitin B protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 163 393 4
95 % 199 490 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 206 504 6
70 % 228 555 9
50 % 231 570 10
40 % 231 574 12
30 % 237 591 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures